adult CB3405 neuron [FBbt_20006866]
Adult brain-intrinsic neuron with its soma in the brain, lateral to the anterior optic tubercle. It belongs to the VLPl&d1_dorsal hemilineage. It has postsynapses in the ipsilateral anterior ventrolateral protocerebrum, the ipsilateral superior clamp and the ipsilateral inferior clamp. It has presynapses in the ipsilateral superior clamp, the ipsilateral anterior ventrolateral protocerebrum, the contralateral superior clamp and the ipsilateral inferior clamp. Its predicted neurotransmitter is acetylcholine. Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).
Note
This page displays the raw VFB json record for this term. Please use the link below to open the term inside the Virtual Fly Brain viewerOpen adult CB3405 neuron in VFB
Term Information
- ID: FBbt_20006866
- Name: adult CB3405 neuron
- Definition: Adult brain-intrinsic neuron with its soma in the brain, lateral to the anterior optic tubercle. It belongs to the VLPl&d1_dorsal hemilineage. It has postsynapses in the ipsilateral anterior ventrolateral protocerebrum, the ipsilateral superior clamp and the ipsilateral inferior clamp. It has presynapses in the ipsilateral superior clamp, the ipsilateral anterior ventrolateral protocerebrum, the contralateral superior clamp and the ipsilateral inferior clamp. Its predicted neurotransmitter is acetylcholine.
- Synonyms:
- Type:
- Comment: Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023).
VFB Term Json
{
"term": {
"core": {
"iri": "http://purl.obolibrary.org/obo/FBbt_20006866",
"symbol": "CB3405",
"types": [
"Entity",
"Adult",
"Anatomy",
"Cell",
"Cholinergic",
"Class",
"Nervous_system",
"Neuron"
],
"short_form": "FBbt_20006866",
"unique_facets": [
"Adult",
"Cholinergic",
"Nervous_system"
],
"label": "adult CB3405 neuron"
},
"description": [
"Adult brain-intrinsic neuron with its soma in the brain, lateral to the anterior optic tubercle. It belongs to the VLPl&d1_dorsal hemilineage. It has postsynapses in the ipsilateral anterior ventrolateral protocerebrum, the ipsilateral superior clamp and the ipsilateral inferior clamp. It has presynapses in the ipsilateral superior clamp, the ipsilateral anterior ventrolateral protocerebrum, the contralateral superior clamp and the ipsilateral inferior clamp. Its predicted neurotransmitter is acetylcholine."
],
"comment": [
"Uncharacterized putative cell type from Schlegel et al. (2023), based on FlyWire v783 (FAFB) data (Dorkenwald et al., 2023). Soma locations are based on the closest annotated neuropil region. Pre- or post-synapse locations are the fewest regions that collectively contain at least 80 percent of all pre- or post-synapses of these neurons in FlyWire. Neurotransmitter predictions are from Eckstein et al. (2023). Other annotations are based on annotations in FlyWire and are available in the supplemental material of Schlegel et al. (2023)."
]
},
"query": "Get JSON for Class",
"version": "08f7a30",
"parents": [
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00050076",
"types": [
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"Adult",
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"has_subClass"
],
"short_form": "FBbt_00050076",
"unique_facets": [
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"Nervous_system",
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],
"label": "adult VLPl&d1 lineage neuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00052046",
"types": [
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"short_form": "FBbt_00052046",
"unique_facets": [
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],
"label": "adult interneuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00058205",
"types": [
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"Neuron",
"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00058205",
"unique_facets": [
"Adult",
"Cholinergic",
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],
"label": "adult cholinergic neuron"
},
{
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00001366",
"types": [
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"has_subClass",
"hasScRNAseq"
],
"short_form": "FBbt_00001366",
"unique_facets": [
"Nervous_system",
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],
"label": "supraesophageal ganglion neuron"
}
],
"relationships": [
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00040043",
"types": [
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],
"short_form": "FBbt_00040043",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain"
],
"label": "anterior ventrolateral protocerebrum"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00040049",
"types": [
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"short_form": "FBbt_00040049",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_subdomain"
],
"label": "inferior clamp"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013003",
"label": "sends synaptic output to region",
"type": "sends_synaptic_output_to_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00040048",
"types": [
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],
"short_form": "FBbt_00040048",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_subdomain"
],
"label": "superior clamp"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013002",
"label": "receives synaptic input in region",
"type": "receives_synaptic_input_in_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00040048",
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"short_form": "FBbt_00040048",
"unique_facets": [
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],
"label": "superior clamp"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013002",
"label": "receives synaptic input in region",
"type": "receives_synaptic_input_in_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00040049",
"types": [
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"Class",
"Nervous_system",
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],
"short_form": "FBbt_00040049",
"unique_facets": [
"Adult",
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"Synaptic_neuropil_subdomain"
],
"label": "inferior clamp"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0013002",
"label": "receives synaptic input in region",
"type": "receives_synaptic_input_in_region"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00040043",
"types": [
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"Synaptic_neuropil",
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],
"short_form": "FBbt_00040043",
"unique_facets": [
"Adult",
"Nervous_system",
"Synaptic_neuropil_domain"
],
"label": "anterior ventrolateral protocerebrum"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0002100",
"label": "has soma location",
"type": "has_soma_location"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/FBbt_00048470",
"types": [
"Entity",
"Adult",
"Anatomy",
"Class",
"Nervous_system"
],
"short_form": "FBbt_00048470",
"unique_facets": [
"Adult",
"Nervous_system"
],
"label": "cell body rind of adult anterior optic tubercle"
}
},
{
"relation": {
"iri": "http://purl.obolibrary.org/obo/RO_0000053",
"label": "bearer of",
"type": "bearer_of"
},
"object": {
"symbol": "",
"iri": "http://purl.obolibrary.org/obo/PATO_0000618",
"types": [
"Entity",
"Class"
],
"short_form": "PATO_0000618",
"unique_facets": [
"Class"
],
"label": "bilateral"
}
}
],
"xrefs": [],
"anatomy_channel_image": [],
"pub_syn": [],
"def_pubs": [
{
"core": {
"symbol": "",
"iri": "http://flybase.org/reports/Unattributed",
"types": [
"Entity",
"Individual",
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],
"short_form": "Unattributed",
"unique_facets": [
"pub"
],
"label": ""
},
"FlyBase": "",
"PubMed": "",
"DOI": ""
}
]
}
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